PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515539.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 362aa    MW: 40569.7 Da    PI: 4.8509
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23e-13175221455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++Er+RR+++ ++f  L   +P +      K +Ka+iL+ A++Y+k+Lq
  XP_004515539.1 175 DHIMAERKRRQELTERFIALSATIPGL-----SKTDKASILRAAIDYVKQLQ 221
                     699***********************8.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.53E-12169224No hitNo description
SuperFamilySSF474593.4E-17171232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.834171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.6E-11175221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-17175232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-15177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MEESWENFHL PTDQLDCGDD YFIDNCDNIN TDGDDFLREI LLQTPQTFSS ESEISEYSFQ  60
QVQNDSVTVN VNGVVEVVGN MVKSNSSNSI VSQKQEDLNP KKVPPRRCSL PKTYILSFDN  120
STMIPATPEP CLDFEGKRDS PLVSNKRSQE TKNGERKTNE RNGVKRPRSG SQTVDHIMAE  180
RKRRQELTER FIALSATIPG LSKTDKASIL RAAIDYVKQL QERVNELEKE DKNVGVASVM  240
VLKKTNLCGN NDNEDTNSCE TNCDDDCNNI LPEIEARVMG KEVLIEIHCK KQNGIELKLL  300
NHLENLQLFV TGSSVLPFGK SAISITIIGQ MSEGYKVTGN DLVKSIRKVL LKPQMVCGSD  360
PY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179184ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515539.10.0PREDICTED: transcription factor bHLH18-like
TrEMBLG7JFR31e-160G7JFR3_MEDTR; Helix loop helix DNA-binding domain protein
STRINGGLYMA08G23050.21e-119(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-41bHLH family protein